Getting started
Installing pymbar
This documentation covers pymbar
4. For the previous versions of pymbar, see: pymbar 3.0.7.
conda (recommended)
The easiest way to install the pymbar
release is via conda:
$ conda install -c conda-forge pymbar
You can also install pymbar
from the Python package index using pip
:
$ pip install pymbar
Development version
The development version can be installed directly from GitHub via pip
:
$ pip install git+https://github.com/choderalab/pymbar.git
In beta testing, this is way to download pymbar 4.
Running the tests
Running the tests is a great way to verify that everything is working.
The test suite uses pytest, in addition to statsmodels and pytables, which you can install via conda
:
$ conda install pytest statsmodels
You can then run the tests from within the pymbar directory with:
$ pytest -v pymbar